To utilize the hydraulic and hydrological models when simulating floods in agricultural watersheds, it is necessary to consider agricultural reservoirs, farmland, and farmland drainage system, which are characteristics of agricultural watersheds. However, most of them are developed individually by different researchers, also, each model has a different simulation scope, so it is hard to use them integrally. As a result, there is a need to link each hydraulic and hydrological model. Therefore, this study established an integrated flood simulation system for the comprehensive flood simulation of agricultural reservoir watersheds. The system can be applied easily to various watersheds because historical weather data and the SSP (Shared Socio-economic Pathways) climate change scenario database of ninety weather stations were built-in. Individual hydraulic and hydrological models were coded and coupled through Python. The system consists of multiplicative random cascade model, Clark unit hydrograph model, frequency analysis model, HEC-5 (Hydrologic Engineering Center-5), HEC-RAS (Hydrologic Engineering Center-River Analysis System), and farmland drainage simulation model. In the case of external models with limitations in conceptualization, such as HEC-5 and HEC-RAS, the python interpreter approaches the operating system and gives commands to run the models. All models except two are built based on the logical concept.