BACKGROUND: Biochar-based fertilizers delay the nutrient release and feature a slow release effect for agricultural and environmental advantages. This experiment was conducted to evaluate agro-environmental effects of different application ratios of modified biochar pellets supplemented. METHODS AND RESULTS: The treatments consisted of the control, 40% N, 60% N and 60% N (0.07M MgO) of modified supplemented biochar pellets (MSBP), which were based on recommended ratio of nitrogen for rice cultivation. For the paddy water, the NH4-N and NO₃-N concentrations in whole treatments rapidly increased at 84 days and 40 days after transplanting, respectively. The PO₄-P concentrations in the MSBP were generally lower than those of the control. For the paddy soil, NH₄-N concentrations in the MSBP were higher than those of the control at 5 days after transplanting, while NO₃-N concentrations were not significantly different in the treatments through rice cultivation. P₂O₅ concentrations in the control were higher than those of the MSBP until 40 days after transplanting while K₂O concentrations were not significantly different among the treatment. The highest carbon sequestration was 970 kg ha^-1 in the 60% N (0.07M MgO), and the potential carbon storage in the 60% N (0.07M MgO) was higher at 222 kg ha^-1 than the control during rice cultivation. It shown that the rice yield in the control was not significantly different from the 40% N and 60% N (0.07M MgO) application plots. CONCLUSION: Application of MSBP for rice cultivation was effective for carbon sequestration and agro-environmental effects even though nitrogen application ratio was reduced at 40% based on recommended application ratio of fertilizer.